4E · Physical principles of living systems

Atoms, nuclear decay, and electronic structure

Gen ChemPhysics

The atom from the inside out: its particles and isotopes, the quantum description of its electrons (quantum numbers, orbitals, electron configuration), the periodic trends that fall out of that structure, and the nuclear phenomena — radioactive decay, half-life, and mass–energy — that come from the nucleus.

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Atomic structure and electrons

Gen Chem high-yield

An atom is protons + neutrons (the nucleus) surrounded by electrons in orbitals. Electrons fill orbitals by the Aufbau, Pauli, and Hund rules, and the resulting configuration governs the atom's chemistry and its place in the periodic table.

The atomic number (Z, protons) defines the element; the mass number (A) is protons + neutrons; isotopes share Z but differ in neutrons. Electrons occupy orbitals described by four quantum numbers, filling from lowest energy up. The valence configuration is what reacts, and reading it off the periodic table — block by block — is the single most useful chemistry skill the table provides.

Subatomic particles and isotopes

term Gen Chem

Protons (charge +1, set the element via Z) and neutrons (neutral) sit in the nucleus; electrons (charge −1) surround it. Isotopes = same Z, different neutron count (different A); ions = changed electron count.

Atomic mass on the periodic table is the abundance-weighted average of an element's isotopes. Charge comes from a proton–electron imbalance (cations lost electrons, anions gained them); changing neutrons changes mass and nuclear stability but not chemistry. Distinguishing the three "same element, different ___" cases — isotope (neutrons), ion (electrons), and a new element (protons) — is a clean, common discrete question.

The mole and molar mass

term Gen Chem med-yield

A mole is Avogadro's number (6.022×10²³) of particles; an element's molar mass (g/mol) equals its atomic mass in amu. The mole is the bridge between atomic-scale counts and lab-scale grams.

Chemistry's bookkeeping unit: moles = mass ÷ molar mass = particles ÷ Avogadro's number. Balanced-equation coefficients are mole ratios, so stoichiometry runs grams → moles → (mole ratio) → moles → grams. The mole also sets solution concentration (molarity) and, for gases, links to volume through the ideal gas law (22.4 L per mole at STP). It underlies nearly every quantitative item, so fluency in mole conversions is foundational.

Quantum numbers and orbitals

term PhysicsGen Chem

Four quantum numbers label each electron: n (shell/energy), l (subshell shape: s, p, d, f), mₗ (orbital orientation), and mₛ (spin, ±½). No two electrons in an atom share all four (Pauli).

The principal number n sets energy and size; the azimuthal l (0…n−1) sets the subshell (s/p/d/f) and shape; mₗ (−l…+l) picks the specific orbital; mₛ is spin. Each orbital holds at most two electrons of opposite spin. The number of orbitals per subshell (s=1, p=3, d=5, f=7) sets their capacities (2, 6, 10, 14) — the structure behind the periodic table's block widths.

Electron configuration

process Gen Chem med-yield trap

Fill orbitals lowest-energy first (Aufbau), one electron per orbital before pairing (Hund), opposite spins when paired (Pauli). Watch the exceptions: Cr and Cu (and their group-mates) borrow an s-electron for a stable half/full d-subshell.

Configurations are written by filling order (1s, 2s, 2p, 3s, 3p, 4s, 3d, …) — note 4s fills before 3d. Half-filled and fully-filled subshells are extra stable, so chromium is [Ar]4s¹3d⁵ (not 4s²3d⁴) and copper is [Ar]4s¹3d¹⁰ (not 4s²3d⁹). When transition metals ionize, they lose the 4s electrons first, not the 3d — a frequent trap. An atom with unpaired electrons is paramagnetic (weakly attracted into a magnetic field); one with all electrons paired is diamagnetic.

Don't confuse

Transition metals fill 4s before 3d but ionize by removing 4s first. Writing Fe²⁺ as losing 3d electrons (instead of the 4s pair) is the classic configuration error.

Nuclear chemistry

Physics high-yield

Unstable nuclei decay by alpha (emit a He nucleus), beta (a neutron↔proton conversion with electron/positron emission), or gamma (a photon) emission, each changing Z and A predictably. Decay is first-order, characterized by a constant half-life.

Nuclear stability depends on the neutron-to-proton ratio; unstable nuclei shed mass or charge to reach it. The decay mode sets how Z (and A) change; the decay rate is first-order, so a fixed fraction decays per unit time and the half-life is constant regardless of the starting amount. The energy released traces back to a mass defect converted by E = mc².

Alpha, beta, and gamma decay

distinction Physics high-yield trap

Alpha: emit ⁴₂He → Z−2, A−4. Beta-minus: neutron→proton + e⁻ → Z+1, A same. Beta-plus (positron): proton→neutron → Z−1, A same. Gamma: photon only → Z and A unchanged.

Alpha particles are heavy and weakly penetrating (stopped by paper/skin) but highly ionizing. Beta-minus decay turns a neutron into a proton, emitting an electron — so the atomic number rises by one while mass number is unchanged. Positron (beta-plus) decay and electron capture both lower Z by one. Gamma emission is a high-energy photon released as an excited nucleus relaxes; it changes neither Z nor A. Always balance the nuclear equation: mass numbers and charges each sum equally on both sides.

Don't confuse

Beta-minus decay increases the atomic number (neutron → proton), even though it emits a negative electron. The reflex "negative particle out, so Z drops" is backward — track the nucleon that changed, not the emitted particle's charge.

Half-life and decay kinetics

term Physics high-yield

Radioactive decay is first-order: a constant fraction decays per unit time, so the half-life is constant. After n half-lives, (½)ⁿ of the sample remains.

Because half-life doesn't depend on how much you start with, the amount remaining is N = N₀·(½)^(t/t½). Three half-lives leave one-eighth; this powers radiometric dating (carbon-14), nuclear-medicine dosing, and tracer questions. The decay is exponential, so plotting ln(N) versus time gives a straight line whose slope is the decay constant λ (with t½ = 0.693/λ).

How AAMC tests it

"A sample drops to 12.5% of its initial activity — how many half-lives passed?" 12.5% = 1/8 = (½)³, so three half-lives. Counting halvings beats any formula.

Binding energy, fission, and fusion

term Physics

A nucleus weighs slightly less than its separate nucleons; that mass defect is the binding energy, released as E = mc². Fusion of light nuclei and fission of heavy nuclei both move toward iron (peak binding energy per nucleon) and release energy.

The missing mass when nucleons bind together is the energy holding the nucleus together; because is enormous, a tiny mass change is a huge energy. Binding energy per nucleon peaks around iron, so splitting very heavy nuclei (fission) or combining very light ones (fusion) both release energy by climbing toward that peak. This is the energy source of reactors, weapons, and stars.

Quantum behavior of light and atoms

Physics med-yield

Two experiments anchor the quantum model: the photoelectric effect (light ejects electrons only above a threshold frequency — light is quantized) and atomic spectra (atoms emit/absorb only discrete wavelengths — electron energy levels are quantized).

Classical physics could explain neither result, and together they establish that both light and atomic energy are quantized. The photoelectric effect shows light delivers energy in photon packets (E = hf); atomic line spectra show electrons occupy discrete energy levels and jump between them by absorbing or emitting a photon of exactly the gap energy. This is the thread promised earlier — 4D's E = hf and 4E's electron structure — made concrete.

The photoelectric effect

theory Physics med-yield trap

Light ejects electrons from a metal only if its frequency exceeds a threshold; above it, electron kinetic energy is KE = hf − Φ (Φ = work function). Brighter light ejects more electrons, not faster ones.

The photoelectric effect is the headline evidence that light is quantized into photons of energy E = hf. Below the threshold frequency, no electrons are ejected no matter how intense the light; above it, each photon gives one electron energy hf, of which the work function Φ is spent escaping and the rest becomes kinetic energy (KE_max = hf − Φ). Increasing intensity (more photons) ejects more electrons but does not raise their energy — only higher frequency does.

Don't confuse

Frequency, not intensity, sets whether (and how energetically) electrons are ejected. Bright light below the threshold frequency ejects nothing; the trap is assuming more intensity always means more or faster electrons.

The Bohr model and atomic spectra

theory Physics med-yield

Electrons occupy discrete energy levels (Eₙ = −13.6 eV/n² for hydrogen). Dropping to a lower level emits a photon of exactly the energy gap; absorbing that energy promotes the electron — producing line (not continuous) spectra.

The Bohr model explains why each element has a unique line spectrum: electrons are restricted to quantized levels, and a transition involves a photon of energy ΔE = hf equal to the gap. Emission lines appear when electrons fall to lower levels; absorption lines (dark lines) appear when they jump up. Larger drops (e.g., down to n = 1) emit higher-energy, shorter-wavelength photons. This quantization is the same idea behind UV–Vis absorption and the colors of transition-metal complexes.

Worked question

A nucleus of ²¹⁴₈₂Pb undergoes beta-minus (β⁻) decay. What is the resulting nucleus?

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